Information for 18-CATTGGCAGCGCG (Motif 27)

A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G
Reverse Opposite:
T A G C A C T G A G T C A C T G A T G C G A C T A T C G T G A C A G T C T G C A C T G A A C G T A C T G
p-value:1e-6
log p-value:-1.595e+01
Information Content per bp:1.724
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets54.9 +/- 23.5bp
Average Position of motif in Background53.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CATTGGCAGCGCG
------CAGCC--
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CATTGGCAGCGCG
---DCTCAGCAGG
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CATTGGCAGCGCG--
-NNGCNCTGCGCGGC
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G A C G T A C G T
A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CATTGGCAGCGCG
-SCTGTCARCACC
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CATTGGCAGCGCG
-VBTGWCAGCB--
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CATTGGCAGCGCG
--TTGACAGC---
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CATTGGCAGCGCG
-CTTGGCAA----
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CATTGGCAGCGCG--
-------GGCGCGCT
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CATTGGCAGCGCG-----
--NCANGCGCGCGCGCCA
 A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CATTGGCAGCGCG--
GATATTGACAGCTGCGT
 A C G T A C G T A G T C G T C A G A C T A C G T T A C G A C T G A T G C C T G A A T C G A G T C C T A G G T A C A T C G A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T