Information for 7-CACCGTCTGGRGA (Motif 8)

A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A G T C A G T C C G T A A T C G C T G A A G T C A C T G A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.663e+01
Information Content per bp:1.897
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 24.5bp
Average Position of motif in Background51.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CACCGTCTGGRGA
--CTGTCTGG---
 A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CACCGTCTGGRGA
-------TGGGGA
 A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACCGTCTGGRGA
VBSYGTCTGG---
 A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CACCGTCTGGRGA--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACCGTCTGGRGA-
CACAGCGGGGGGTC
 A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CACCGTCTGGRGA-
NCGCAGCGGGGGGTC
 A C G T A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CACCGTCTGGRGA-
NCNCAGCGGGGGGTC
 A C G T A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CACCGTCTGGRGA
---WDNCTGGGCA
 A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CACCGTCTGGRGA
---GGTCTGGCAT
 A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CACCGTCTGGRGA
------GTGGAT-
 A G T C C G T A A G T C G T A C A C T G A G C T A T G C A C G T A C T G A C T G C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T