Information for 7-TCTCTCCAGT (Motif 20)

A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T
Reverse Opposite:
T C G A T A G C G C A T A C T G T C A G C G T A A T C G T G C A T A C G T C G A
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.654
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif9.02%
Number of Background Sequences with motif2546.0
Percentage of Background Sequences with motif5.18%
Average Position of motif in Targets52.7 +/- 26.0bp
Average Position of motif in Background50.2 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCCAGT
ATTCTCGCGAGA
 A C G T A C G T A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCCAGT
ATCACCCCAT-
 A C G T A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCCAGT
NSCACTYVAV-
 A C G T A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCCAGT
AGCCACTCAAG-
 A C G T A C G T A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCCAGT
ATCACCCCAT-
 A C G T A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T

ETV2/MA0762.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTCTCCAGT-
TATTTCCGGTT
 A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T A C G T
G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCCAGT
RSCACTYRAG-
 A C G T A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCCAGT------
NANTTTCAAGTGGTTAN
 A C G T A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCCAGT---
GTTCTCGCGAGANCC
 A C G T A C G T A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T A C G T A C G T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTCTCCAGT
ATTTTCCATT
 A G C T A T G C A C G T T A G C G C A T A G T C T G A C C G T A A T C G A G C T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T