Information for 12-CAGCTGCACGGCC (Motif 18)

G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A T G C A T C G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C T G
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.894
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif28.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets68.6 +/- 15.9bp
Average Position of motif in Background65.1 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCACGGCC
NNACAGCTGC------
 A C G T A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCACGGCC
GACAGCTGCAG----
 A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCACGGCC
AACAGCTGCAG----
 A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCACGGCC
CAGCAGCTGN------
 A C G T A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCACGGCC
AGCAGCTGCTNN---
 A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGCTGCACGGCC
CAGCTGNT-----
 G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCTGCACGGCC
NGNGACAGCTGCN-----
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCACGGCC
CGCAGCTGCG-----
 A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCACGGCC
AGCAGCTGCT-----
 A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAGCTGCACGGCC
NNVVCAGCTGBN-----
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G A G T C G A C T A C T G A G T C T C G A A T G C A T C G A C T G A G T C A G T C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T