Information for 1-GGGTAAAAGGCCG (Motif 1)

A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T T C G A A G T C A G T C A G T C
p-value:1e-16
log p-value:-3.690e+01
Information Content per bp:1.928
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 28.9bp
Average Position of motif in Background33.3 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAAAGGCCG--
GGGGTCAAAGTCCAAT
 A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

RXRB/MA0855.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAAAGGCCG
GGGGTCAAAGGTCA
 A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAAAGGCCG
GGGGTCAAAGGTCA
 A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAAAGGCCG
GGGGTCAAAGGTCA
 A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGTAAAAGGCCG
AGGGGTCAGAGGTCA
 A C G T A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAAAGGCCG
GAGGTCAAAGGTCA
 A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAAAAGGCCG
TGGGGCAAAGGTCA
 A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGTAAAAGGCCG
GTAGGGCAAAGGTCA
 A C G T A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAAAGGCCG
GAGGTCAAAGGTCA
 A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAAAGGCCG
AGGGTAACAGC---
 A C G T A C T G A C T G C T A G A G C T C G T A C G T A C G T A C G T A C T A G A C T G A G T C G T A C A C T G
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T