Information for 2-CGGGGAGTGC (Motif 8)

A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C
Reverse Opposite:
A C T G T G A C C G T A A G T C A G C T A G T C G T A C A G T C A G T C A C T G
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.840
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif265.7
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets55.1 +/- 23.3bp
Average Position of motif in Background52.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGGGGAGTGC-----
GCTGGGGGGTACCCCTT
 A C G T A C G T A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGGGAGTGC
TGGGGA----
 A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGAGTGC
CTTCGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGAGTGC--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CGGGGAGTGC
NCGCAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGGGGAGTGC---
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CGGGGAGTGC
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGAGTGC
CACAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGGGAGTGC-
-GGGGATTTCC
 A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGGGAGTGC---
-GGGGATTCCCCC
 A G T C A C T G C T A G A C T G A C T G C T G A C T A G C G A T A C T G A G T C A C G T A C G T A C G T
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C