Information for 2-CGCGCGCCCCGGGCGG (Motif 5)

A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G
Reverse Opposite:
A G T C T A G C A C T G A T G C A G T C G T A C A C T G T A C G A T C G A T C G A G T C A T C G G A T C A T C G G T A C C T A G
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.785
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif80.4
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets50.5 +/- 25.8bp
Average Position of motif in Background53.0 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCGG
----CGCCTCAGGCA-
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCGG
----AGCCTCAGGCA-
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGCGCGCCCCGGGCGG-
--NTNGCCTCAGGCNNN
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G A C G T
A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCGG
----AGCCTCAGGCA-
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCGG--
---CCCCCCCGGGGGGGT
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCGG--
---CCCCCCCGGGGGGGT
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCGG
--GGGGCCGAGGCCTG
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCGG-
---CACCCCCGGGGGGG
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G A C G T
A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CGCGCGCCCCGGGCGG
NCANGCGCGCGCGCCA-----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGCGCGCCCCGGGCGG--
---NCNCAGCGGGGGGTC
 A G T C A C T G A T G C C T A G T A G C A C T G T A G C A T G C A T G C G T A C A C T G A C T G A T C G A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C