Information for 13-CAGCCCCTCCTGC (Motif 17)

A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A T C G A T C G C G T A C A T G A T C G A C T G A T C G A G T C G C A T A C T G
p-value:1e-8
log p-value:-1.843e+01
Information Content per bp:1.878
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif32.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.8 +/- 23.7bp
Average Position of motif in Background46.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCCCTCCTGC
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGCCCCTCCTGC-
NAGCCCCGCCCCCN
 A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGCCCCTCCTGC
--GCCCCGCCCCC
 A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGCCCCTCCTGC--
---CCCCTCCCCCAC
 A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAGCCCCTCCTGC
---CACTTCCTGT
 A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C
A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAGCCCCTCCTGC
ATCCCCGCCCCTAAAA-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGCCCCTCCTGC----
--GCCCCGCCCCCTCCC
 A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGCCCCTCCTGC--
---SNGCACCTGCHS
 A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGCCCCTCCTGC
---CACTTCCTGT
 A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAGCCCCTCCTGC----
-----CCCCCTGCTGTG
 A G T C C G T A A C T G A T G C A G T C A T G C G A T C A C G T A T G C A T G C C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G