Information for 1-GCCRCGGCTTTTTGCC (Motif 1)

C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C
Reverse Opposite:
A T C G C T A G A G T C C T G A G T C A T G C A C G T A C T G A C T A G A G T C A G T C T C A G G A T C A C T G C T A G G T A C
p-value:1e-12
log p-value:-2.862e+01
Information Content per bp:1.756
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.9 +/- 25.6bp
Average Position of motif in Background42.4 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCRCGGCTTTTTGCC
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCRCGGCTTTTTGCC--
--CTTGGCANNNTGCCAA
 C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCRCGGCTTTTTGCC
ATGCCCGGGCATGT----
 A C G T A C G T C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCCRCGGCTTTTTGCC-
---TTGGCATGGTGCCA
 C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C A C G T
A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCCRCGGCTTTTTGCC-----
------WCATTTTGKCCTCYT
 C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCCRCGGCTTTTTGCC--
----TGACCTTTGCCCTA
 C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCCRCGGCTTTTTGCC---
----TGACCTTTGCCCTAN
 C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCCRCGGCTTTTTGCC--
----TGACCTTTGCCCCA
 C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCCRCGGCTTTTTGCC
NNGGCCACGCCTTTN----
 A C G T A C G T A C G T C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GCCRCGGCTTTTTGCC--
----TGACCTTTGACCTN
 C A T G A G T C G T A C C T A G A G T C C T A G A C T G G A T C A G C T C G A T A C G T A C G T A G C T T C A G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C