Information for 9-TTTTTTTWAAARG (Motif 12)

C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G
Reverse Opposite:
A G T C G A T C A G C T A C G T C G A T C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.116e+01
Information Content per bp:1.799
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif222.0
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets50.1 +/- 23.9bp
Average Position of motif in Background46.9 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTTTWAAARG
NNNNTTTTTTTTTNAAC-
 A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTTTWAAARG
GNATTTTTTTTTTGANC-
 A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTWAAARG-
TTTTTTTTCNNGTN
 C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTTWAAARG-
NANTTATATATAANGN
 A C G T A C G T C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTTWAAARG
NNTTTTTCTTATNT
 A C G T C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTTTTTTWAAARG
---ATTTGAATT-
 C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTTTTTTWAAARG-
----TTTTATTRGN
 C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTTTTTTWAAARG
---TTTTATKRGG
 C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTTTTTWAAARG
-GNCTATAAAAGG
 C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTTTTTTWAAARG--
-----TTTAATTGCN
 C G A T C G A T C G A T C G A T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C