Information for 3-GAGGCAAAAA (Motif 9)

C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A
Reverse Opposite:
G A C T G C A T G C A T G A C T C A G T A C T G G A T C G T A C A G C T G A T C
p-value:1e-6
log p-value:-1.520e+01
Information Content per bp:1.679
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif9.02%
Number of Background Sequences with motif1633.8
Percentage of Background Sequences with motif3.35%
Average Position of motif in Targets51.1 +/- 27.1bp
Average Position of motif in Background50.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAGGCAAAAA---
ARGAGGMCAAAATGW
 A C G T A C G T C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGCAAAAA---
CAATTGCAAAAATAT
 A C G T A C G T C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

ATF4/MA0833.1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAGGCAAAAA
GGATGATGCAATA-
 A C G T A C G T A C G T A C G T C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T

CDX2/MA0465.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGGCAAAAA-
AAGCCATAAAA
 C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A A C G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGGCAAAAA-
AAGGCAAGTGT
 C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGGCAAAAA-----
AGAGCCATAAAATTCG
 A C G T C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGGCAAAAA
MTGATGCAAT--
 A C G T A C G T C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGGCAAAAA
NATGTTGCAA---
 A C G T A C G T A C G T C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCAAAAA
TGAGTCA----
 A C G T C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGGCAAAAA
ATGATGCAAT--
 A C G T A C G T C T A G C T G A C A T G C T A G G T A C G T C A C T G A C G T A C G T A C T G A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T