Information for 2-SCTGAGGYCMCCRCGG (Motif 6)

A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G C T A C T G A C T G C A G T A C T G C T G A A G T C A G T C A C G T A G T C C G T A A C T G A T C G
p-value:1e-7
log p-value:-1.640e+01
Information Content per bp:1.883
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 25.9bp
Average Position of motif in Background87.6 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:SCTGAGGYCMCCRCGG
--TRAGGTCA------
 A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SCTGAGGYCMCCRCGG
SCCTSAGGSCAW-----
 A C G T A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-SCTGAGGYCMCCRCGG
GCCTCAGGGCAT-----
 A C G T A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:SCTGAGGYCMCCRCGG
-GTGACGTCACCG---
 A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SCTGAGGYCMCCRCGG
--TGACGTCA------
 A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SCTGAGGYCMCCRCGG
---AAGGTCAC-----
 A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SCTGAGGYCMCCRCGG----
---AAATTCCCCCCGGAAGT
 A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SCTGAGGYCMCCRCGG
-ATGACGTCAYYN---
 A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G A C G T A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SCTGAGGYCMCCRCGG
-RTGACGTCAYCN---
 A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:SCTGAGGYCMCCRCGG
-ATGACGTCATCN---
 A T G C A G T C A C G T A C T G G T C A A C T G A C T G A G C T A G T C G T A C A G T C A G T C T C A G A G T C A C T G A C T G
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T A C G T A C G T