Information for 1-ACCTCTCAKA (Motif 2)

G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A
Reverse Opposite:
A C G T T G A C C G A T C T A G G T C A C T A G C G T A A C T G A T C G A C G T
p-value:1e-9
log p-value:-2.297e+01
Information Content per bp:1.765
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif137.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets56.4 +/- 25.1bp
Average Position of motif in Background52.8 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ACCTCTCAKA--
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACCTCTCAKA--
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACCTCTCAKA
AGCCACTCAAG
 A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACCTCTCAKA--
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACCTCTCAKA--
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACCTCTCAKA
AASCACTCAA-
 A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACCTCTCAKA
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCTCAKA
TGACCYCT----
 A C G T A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACCTCTCAKA--
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ACCTCTCAKA
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C A G T C C G A T G A T C A C G T A G T C G C T A A C T G C G T A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A