Information for 5-CCCGCCGTGGCTTTTC (Motif 13)

A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A C G T A C G T A A T C G A G T C A G T C C T G A A G T C A C T G A C T G A G T C A C T G A C T G A T C G
p-value:1e-3
log p-value:-9.046e+00
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 24.0bp
Average Position of motif in Background40.5 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCGCCGTGGCTTTTC
GGGGCCGAGGCCTG--
 A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCGTGGCTTTTC
NNTTCCCGCCC---------
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCCGTGGCTTTTC
TTTCCCGCCMAV-------
 A C G T A C G T A C G T A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCGTGGCTTTTC
TACGCCCCGCCACTCTG----
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCGTGGCTTTTC
TTCCCGCCWG--------
 A C G T A C G T A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCGTGGCTTTTC
GACCCCCCGCTGTG-------
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCGTGGCTTTTC
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCGTGGCTTTTC
GACCCCCCGCTGTGC---
 A C G T A C G T A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCCGCCGTGGCTTTTC--
---GGNGCGNCTGTTNNN
 A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCGTGGCTTTTC
NYTTCCCGCC----------
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A G T C G T A C A C T G A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A G T C
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T