Information for 3-KWTATTRGVATGA (Motif 7)

C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C G T C A A C G T A T C G A G T C G A C T C T G A C G T A A C G T C G T A C G A T G T C A
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.743
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif52.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets55.9 +/- 25.9bp
Average Position of motif in Background51.6 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KWTATTRGVATGA
BTVATTWGCATA-
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:KWTATTRGVATGA
---ATTTGCATAA
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KWTATTRGVATGA
-TAATTTGCATAA
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A
A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KWTATTRGVATGA-
-AAATTAGCATAAT
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A A C G T
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:KWTATTRGVATGA
CTCATTTGCATW-
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KWTATTRGVATGA
---ATTTGCATA-
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KWTATTRGVATGA
-TAATTTGCATAA
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A
A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.61
Offset:8
Orientation:forward strand
Alignment:KWTATTRGVATGA-
--------CATGAC
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:KWTATTRGVATGA-
--AATTTGCATANT
 C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A A C G T
A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KWTATTRGVATGA--
TNTAATTTGCATANNN
 A C G T C A G T C G T A A C G T T C G A A C G T A G C T C T G A C T A G T A G C C G T A A C G T C T A G C G T A A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A