Information for 19-TTCCGTGCGTCTGTGG (Motif 41)

A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G
Reverse Opposite:
A T G C G T A C C G T A A G T C C G T A A C T G G T C A T G A C A T C G A G T C C G T A A G T C A C T G A C T G T G C A C T G A
p-value:1e-6
log p-value:-1.431e+01
Information Content per bp:1.891
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.1 +/- 24.3bp
Average Position of motif in Background37.4 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTCCGTGCGTCTGTGG--
---GGNGCGNCTGTTNNN
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.57
Offset:8
Orientation:forward strand
Alignment:TTCCGTGCGTCTGTGG---
--------GTCTGTGGTTT
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCCGTGCGTCTGTGG
TTGCGTGCVA------
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTCCGTGCGTCTGTGG----
----NNGCGTGTGTGCNGCN
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TTCCGTGCGTCTGTGG----
--------NNHTGTGGTTWN
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTCCGTGCGTCTGTGG
----VBSYGTCTGG--
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TTCCGTGCGTCTGTGG---
---------GCTGTGGTTT
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TTCCGTGCGTCTGTGG
---------GCTGTG-
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTCCGTGCGTCTGTGG--
--CNNNGCTACTGTANNN
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G A C G T A C G T
A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TTCCGTGCGTCTGTGG--
--TNNTGCTACTGTNNNN
 A G C T A C G T A G T C G T A C A C T G A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C T G A T C G A C G T A C G T
A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T