Information for 15-CTCCTCTGAKGST (Motif 31)

A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T
Reverse Opposite:
G C T A A T C G T A G C G T A C C A G T A T G C C T G A A C T G C G T A A C T G T A C G G T C A A C T G
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.683
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif417.6
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets54.8 +/- 26.7bp
Average Position of motif in Background51.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CTCCTCTGAKGST
TACGAGACTCCTCTAAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCCTCTGAKGST
ATGCCCTGAGGC-
 A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTCTGAKGST
TNTCCTGCTGTGNNG--
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCCTCTGAKGST--
ATTTCCTTTGATCTATA
 A C G T A C G T A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTCTGAKGST--
NNTTCCTTTGATCTANA
 A C G T A C G T A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTCTGAKGST--
NNTTCCTTTGATCTNNA
 A C G T A C G T A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTCTGAKGST
CCCCCTGCTGTG-----
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTCCTCTGAKGST--
AATCCCTTTGATCTATC
 A C G T A C G T A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCCTCTGAKGST-
TNCCTTTGATCTTN
 A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCCTCTGAKGST
GCTTCC--------
 A C G T A G T C A C G T A T G C G T A C G C A T T A G C G A C T T A C G G T C A A C T G A T C G T A G C C G A T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T