Information for 13-GCACAGCGCCTCC (Motif 28)

A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C T G A T G C A C T G A G T C A C G T A C T G G A C T A C T G A G T C
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.7 +/- 27.3bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCACAGCGCCTCC----
---NAGCCCCGCCCCCN
 A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCACAGCGCCTCC
-CACAGN------
 A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCACAGCGCCTCC
GCCGCGCAGTGCGT--
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCACAGCGCCTCC---
-----GCCCCGCCCCC
 A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCACAGCGCCTCC
AGCAACAGCCGCACC
 A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCACAGCGCCTCC--
-----GCCCCGCCCC
 A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCACAGCGCCTCC
GGCCCCGCCCCC--
 A C G T A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCACAGCGCCTCC--
GVACAGNMTGTYCTB
 A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCACAGCGCCTCC--
AGNACANNNTGTNCTN
 A C G T A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCACAGCGCCTCC---
----KGCCCTTCCCCA
 A C T G A G T C C G T A A G T C C G T A A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A