Information for 5-TCCTTGAGTG (Motif 27)

C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G
Reverse Opposite:
G T A C T C G A A T G C A C G T A T G C G T C A C T G A A C T G T C A G G C T A
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.683
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif7.07%
Number of Background Sequences with motif1340.8
Percentage of Background Sequences with motif2.79%
Average Position of motif in Targets51.7 +/- 27.2bp
Average Position of motif in Background50.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TCCTTGAGTG---
--CTTGAGTGGCT
 C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TCCTTGAGTG--
--BTBRAGTGSN
 C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:TCCTTGAGTG---
---TTGAGTGSTT
 C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TCCTTGAGTG--
--CTYRAGTGSY
 C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.75
Offset:3
Orientation:forward strand
Alignment:TCCTTGAGTG---
---TTRAGTGSYK
 C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TCCTTGAGTG---
---TTAAGTGCTT
 C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCCTTGAGTG------
NTNNTTAAGTGGNTNAN
 A C G T C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCCTTGAGTG-
--NTCAAGTGG
 C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCTTGAGTG------
NTNNTTAAGTGGTTANN
 A C G T C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCCTTGAGTG-
---TTGATTGN
 C G A T A G T C G T A C G A C T A C G T A T C G G T C A T A C G A G C T A C T G A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G