Information for 8-TGTCTTTTAGGAT (Motif 19)

A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C G T A C C A G T C G T A C G T A G T C A C G T A A C T G C G T A A G T C C G T A
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.923
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.5 +/- 27.8bp
Average Position of motif in Background39.9 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT------
---CTACTAGGATGTNNTN
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

HOXC10/MA0905.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT
---NTTTTACGAC
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT
---NTTTTACGAC
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTTTTAGGAT
TTGACTTTT-----
 A C G T A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT-
---NTTTTACGACC
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT-
--ANTTTTACGACC
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT-
---NTTTTACGACT
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXC12/MA0906.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT-
---NTTTTACGACC
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT-
---NTTTTACGAGN
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGTCTTTTAGGAT----
-NNNTTTTACGACNTTN
 A C G T A C T G A C G T A G T C A C G T A C G T C G A T A C G T G C T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A