Information for 6-CTGTGAAATTCAGCCK (Motif 12)

G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
Reverse Opposite:
G T A C A T C G A T C G A G T C A C G T A C T G T C G A C G T A C G A T A C G T A C G T A G T C C G T A A G T C C T G A A C T G
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.3 +/- 23.4bp
Average Position of motif in Background62.6 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGTGAAATTCAGCCK
-TGTGGATTNNN----
 G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAAATTCAGCCK
NNTGTGGATTSS-----
 A C G T G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGTGAAATTCAGCCK
---TGAGTGACAGSC-
 G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAATTCAGCCK
CCTTTGATGT-------
 A C G T G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CTGTGAAATTCAGCCK
GAAAAGGTGTGAAAATT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGTGAAATTCAGCCK
-TTTGAAACCG-----
 G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTGTGAAATTCAGCCK
AGATGCAATCCC----
 G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAATTCAGCCK
CCTTTGAWGT-------
 A C G T G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAATTCAGCCK
CSTGGGAAAD-------
 A C G T G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGAAATTCAGCCK
NATTGTGCAAT-------
 A C G T A C G T G T A C A G C T C T A G A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A T G C A T G C A C G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T