p-value: | 1e-10 |
log p-value: | -2.512e+01 |
Information Content per bp: | 1.913 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.82% |
Number of Background Sequences with motif | 3.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.8 +/- 30.0bp |
Average Position of motif in Background | 49.6 +/- 32.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATGCCTGGCAGG GTCATGCHTGRCTGS |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CATGCCTGGCAGG ----CTTGGCAA- |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CATGCCTGGCAGG NGTCACGCTTGGCTGC |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATGCCTGGCAGG- --TGAGTGACAGSC |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CATGCCTGGCAGG -BTGABTGACAGS |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CATGCCTGGCAGG -NTGATTGACAGN |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CATGCCTGGCAGG GGGGCTYGKCTGGGA-- |
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Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATGCCTGGCAGG --TTCCNGGAAG- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CATGCCTGGCAGG --GGTCTGGCAT- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CATGCCTGGCAGG ---VGCTGWCAVB |
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