Information for 1-BYTCCSATTGGCC (Motif 1)

A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C
Reverse Opposite:
T C A G T C A G A G T C G T A C C G T A T G C A A G C T T A G C C T A G T A C G T G C A C T G A T A G C
p-value:1e-30
log p-value:-6.927e+01
Information Content per bp:1.615
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif13.29%
Number of Background Sequences with motif1530.2
Percentage of Background Sequences with motif3.17%
Average Position of motif in Targets53.7 +/- 26.1bp
Average Position of motif in Background49.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:BYTCCSATTGGCC
---CCGATTGGCT
 A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.88
Offset:3
Orientation:reverse strand
Alignment:BYTCCSATTGGCC-----
---CTGATTGGTCNATTT
 A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.87
Offset:4
Orientation:reverse strand
Alignment:BYTCCSATTGGCC---
----TGATTGGCTANN
 A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---BYTCCSATTGGCC--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.71
Offset:7
Orientation:forward strand
Alignment:BYTCCSATTGGCC
-------TTGGCA
 A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:BYTCCSATTGGCC--
------NTTGGCANN
 A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:BYTCCSATTGGCC
---TTGATTGN--
 A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-BYTCCSATTGGCC--
ACTCCTAATTAGTCGT
 A C G T A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-BYTCCSATTGGCC---
TGTTCCCATTGTGTACT
 A C G T A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:BYTCCSATTGGCC
----CCATTGTTC
 A T C G G A C T A C G T A T G C G A T C A T C G T C G A A C G T C G A T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C