Information for 10-CTGTRATTACAGS (Motif 10)

G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C
Reverse Opposite:
A T C G G T A C A C G T A T C G A C G T T C G A G T C A C A G T A G C T T C G A T A G C C G T A C T A G
p-value:1e-7
log p-value:-1.788e+01
Information Content per bp:1.705
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif91.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets55.3 +/- 23.2bp
Average Position of motif in Background50.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0022.1_Dlx3/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTGTRATTACAGS--
NNNGGTAATTATNGNGN
 A C G T A C G T G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0061.1_Hoxb6/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTGTRATTACAGS
TATTGGTAATTACCTT
 A C G T A C G T A C G T G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

MEOX2/MA0706.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGTRATTACAGS
-NTTAATTACN--
 G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C
A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGTRATTACAGS
-TCTAATTAAA--
 G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C
A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGTRATTACAGS--
GTCGGTAATTATNGNGN
 A C G T A C G T G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGTRATTACAGS-----
-TCNCTTTACAGCGNNNT
 G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTGTRATTACAGS
TTGAATGAAATTCGA--
 A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGTRATTACAGS
--GTAATTAG---
 G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C
A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGTRATTACAGS
-TTTAATTANN--
 G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C
A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGTRATTACAGS
-AGTAATTAAC--
 G A T C A C G T A C T G A G C T C T G A G T C A C A G T A G C T T G C A A T G C C G T A A C T G T A G C
A C G T T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C A C G T A C G T