Information for 3-CTGTCATGCC (Motif 7)

A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
Reverse Opposite:
C A T G C A T G G T A C C G T A C G A T C A T G T C G A T G A C C G T A C T A G
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.723
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif5.86%
Number of Background Sequences with motif204.1
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets51.4 +/- 23.5bp
Average Position of motif in Background50.1 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTGTCATGCC
NTGTCAN---
 A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCATGCC
CCTGTCAA---
 A C G T A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCATGCC
GCTGTCAA---
 A C G T A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CTGTCATGCC
--GTCATN--
 A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------CTGTCATGCC
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------CTGTCATGCC
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTGTCATGCC
YTGWCADY--
 A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CTGTCATGCC-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CTGTCATGCC
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGTCATGCC
-AGTCACGC-
 A G T C A C G T A C T G A G C T G A T C G C T A C G A T C A T G G T A C G T A C
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T