Information for 10-HTTTCAGACAATG (Motif 19)

G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T C T A G A G C T A G T C C G A T A C T G C G T A C G T A C G T A C G T A
p-value:1e-7
log p-value:-1.634e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.3 +/- 18.7bp
Average Position of motif in Background68.1 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:HTTTCAGACAATG--
------GACAATGNN
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:HTTTCAGACAATG----
--CTCACACAATGGCGC
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-HTTTCAGACAATG-
ATTTGCATACAATGG
 A C G T G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:HTTTCAGACAATG-
----VRAACAATGG
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:HTTTCAGACAATG-
----AAAACAATGG
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.66
Offset:5
Orientation:forward strand
Alignment:HTTTCAGACAATG--
-----RAACAATGGN
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:HTTTCAGACAATG-
----VRRACAAWGG
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:HTTTCAGACAATG
-------ACAAAG
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:HTTTCAGACAATG-
------RACAAWGG
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:HTTTCAGACAATG-
----RNAACAATGG
 G A C T A C G T G C A T A C G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G