Information for 5-AAAAAAACAA (Motif 26)

C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A
Reverse Opposite:
A G C T G A C T T A C G A C G T G A C T A G C T C G A T A G C T A C G T G C A T
p-value:1e-3
log p-value:-7.930e+00
Information Content per bp:1.658
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif9.19%
Number of Background Sequences with motif2728.8
Percentage of Background Sequences with motif5.55%
Average Position of motif in Targets42.0 +/- 27.0bp
Average Position of motif in Background49.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:AAAAAAACAA--
AAACAAACATTC
 C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AAAAAAACAA
AAATAAACA-
 C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAACAA---
AACAAACAACAAGAG
 A C G T A C G T C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAACAA---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAACAA--
CAAAAGTAAACAAAG
 A C G T A C G T A C G T C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAACAA-
TAAGTAAACAAA
 A C G T C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAACAA----
AAAAATAACAAACGG
 A C G T C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AAAAAAACAA--
-AATAAACAATN
 C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T A C G T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAACAA----
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAACAA----
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T C G T A T G C A T C G A G C T A T C G A C T G A T G C A A T G C C T G A T C G A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C