Information for 9-CTAGCGTCTG (Motif 17)

G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G
Reverse Opposite:
A G T C C G T A A C T G T G C A A G T C C T A G A T G C C G A T G T C A A C T G
p-value:1e-4
log p-value:-9.755e+00
Information Content per bp:1.780
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif46.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets46.9 +/- 18.3bp
Average Position of motif in Background52.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CTAGCGTCTG-
-VBSYGTCTGG
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CTAGCGTCTG-
---CTGTCTGG
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTAGCGTCTG------
NNTNNTGTCTGGNNTNG
 A C G T G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTAGCGTCTG-
---TWGTCTGV
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAGCGTCTG-----
GGNGCGNCTGTTNNN
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTAGCGTCTG----
--NVCAGCTGBBNN
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTAGCGTCTG
--ANCAGCTG
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTAGCGTCTG----
----GGTCTGGCAT
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTAGCGTCTG--
--AGCAGCTGCT
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T A C G T
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTAGCGTCTG--
--ACCATCTGTT
 G T A C C A G T C G T A A T C G A G T C A C T G A C G T A G T C A C G T C T A G A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T