Information for 14-ATAAATCAGAGGCAAA (Motif 25)

C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A T G C G T A C A C G T A G T C A G C T A C T G C G T A A C G T A C G T A C G T G T C A A C G T
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 29.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa9/MA0594.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATAAATCAGAGGCAAA
GCCATAAATCA--------
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATAAATCAGAGGCAAA
GGCCATAAATCA--------
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATAAATCAGAGGCAAA
GGCCATAAATCAC-------
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATAAATCAGAGGCAAA
GGCCATAAATCA--------
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATAAATCAGAGGCAAA
-CAAATCACTG-----
 C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATAAATCAGAGGCAAA
TCATCAATCA--------
 A C G T A C G T C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATAAATCAGAGGCAAA
--AAATCACAGCA---
 C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATAAATCAGAGGCAAA
--ACATCAAAGGNA--
 C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATAAATCAGAGGCAAA
AAAGATCAAAGG----
 C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATAAATCAGAGGCAAA
NNNAGATCAAAGGANNN
 A C G T C G T A A C G T C G T A C G T A C G T A A C G T A G T C C T G A A C T G T C G A A C T G A T C G A G T C C G T A G T C A C G T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T