Information for 4-GAATYAAACATKC (Motif 6)

A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
Reverse Opposite:
A C T G G T A C C G T A A C G T A C T G A C G T A C G T A C G T T C A G C T G A A C G T A C G T A G T C
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.864
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.2 +/- 16.2bp
Average Position of motif in Background29.6 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GAATYAAACATKC
-AAACAAACATTC
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GAATYAAACATKC
-AAATAAACA---
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAATYAAACATKC
--ATTAAA-----
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAATYAAACATKC
-ATGTAAACADGS
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

FOXP2/MA0593.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAATYAAACATKC
-AAGTAAACAAA-
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAATYAAACATKC
--AATAAACAATN
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAATYAAACATKC
TAAGTAAACAAA-
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAATYAAACATKC
AAAGTAAACA---
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAATYAAACATKC
---GTAAACAA--
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAATYAAACATKC
AAAGTAAACA---
 A C T G C G T A C G T A A G C T A G C T C G T A C G T A C G T A A G T C C G T A C G A T C A G T A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T