Information for 2-GNWCAGKNCHDKC (Motif 2)

A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
Reverse Opposite:
A C T G G T C A G T C A C A G T A C T G C G A T T G C A G T A C C G A T A T C G G C A T A T C G T G A C
p-value:1e-35
log p-value:-8.099e+01
Information Content per bp:1.521
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif19.16%
Number of Background Sequences with motif2618.7
Percentage of Background Sequences with motif5.92%
Average Position of motif in Targets46.1 +/- 25.1bp
Average Position of motif in Background50.0 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GNWCAGKNCHDKC
---CTGTTCCTGG
 A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GNWCAGKNCHDKC
-CACAGN------
 A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GNWCAGKNCHDKC
--TRAGGTCA---
 A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GNWCAGKNCHDKC
----AGGTCA---
 A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GNWCAGKNCHDKC---
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T A C G T A C G T A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GNWCAGKNCHDKC
GCCGCGCAGTGCGT--
 A C G T A C G T A C G T A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GNWCAGKNCHDKC----
---CAGGCCNNGGCCNN
 A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GNWCAGKNCHDKC
-TKCTGTTCCA--
 A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GNWCAGKNCHDKC
WDNCTGGGCA---
 A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GNWCAGKNCHDKC
--TCAGTCTT---
 A C T G T A G C C G T A A T G C C G T A A C T G A C G T C G T A A G T C G T C A C A G T C A G T T G A C
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T