Information for 11-CCCTTAGCTAGTG (Motif 14)

A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G
Reverse Opposite:
A G T C G T C A A T G C A G C T G T C A A C T G A G T C C G A T C G T A C T G A C T A G A C T G C T A G
p-value:1e-8
log p-value:-1.939e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.9 +/- 29.7bp
Average Position of motif in Background55.9 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCTTAGCTAGTG-----
--TNNTGCTACTGTNNNN
 A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCTTAGCTAGTG-----
--CNNNGCTACTGTANNN
 A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCCTTAGCTAGTG
--GTTAACTAGN-
 A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTAGCTAGTG
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTAGCTAGTG
BCMATTAG------
 A C G T A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTAGCTAGTG---
GANGTTAACTAGTTTNN
 A C G T A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

MYBL1/MA0776.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCCTTAGCTAGTG
ACCGTTAACGGT--
 A C G T A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCCTTAGCTAGTG-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTAGCTAGTG
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCCTTAGCTAGTG
NCCTTATCTG---
 A G T C A G T C A G T C A G C T C G A T C G T A C T A G A G T C A C G T C T G A A T C G A C G T A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T