Information for 8-CAGAWACATACTG (Motif 10)

G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G
Reverse Opposite:
G T A C C G T A A C T G A C G T G T C A A G C T A C T G A C G T C G T A A C G T A G T C A C G T C T A G
p-value:1e-9
log p-value:-2.138e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.2 +/- 10.8bp
Average Position of motif in Background61.7 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGAWACATACTG
NTTGATACATT---
 A C G T G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGAWACATACTG
CCAGACRSVB----
 A C G T G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGAWACATACTG-
AAAGTAAACAAAAATT
 A C G T A C G T G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGAWACATACTG---
-VAGRACAKNCTGTBC
 G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G A C G T A C G T A C G T
A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGAWACATACTG---
-AAGAACATWHTGTTC
 G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G A C G T A C G T A C G T
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGAWACATACTG
CCAGACAG------
 A C G T G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGAWACATACTG
CCAGGAACAG----
 A C G T G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CAGAWACATACTG
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAGAWACATACTG
----NANANAC--
 G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G
A C G T A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CAGAWACATACTG
ATGCCAGACN-------
 A C G T A C G T A C G T A C G T G A T C C G T A C T A G C G T A G C A T C G T A A G T C C T G A A C G T G T C A A G T C C G A T A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T