Information for 2-TCGCCCTTTCCCT (Motif 6)

A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G T C A G C G T A C G T A C G T A T A C G A C T G A C T G A G T C A C T G C G T A
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.942
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.4 +/- 25.1bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCGCCCTTTCCCT-
TGACCTTTGCCCTA
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCGCCCTTTCCCT---
----ACTTTCACTTTC
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCGCCCTTTCCCT----
--TCACTTTCACTTTCN
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCGCCCTTTCCCT
-KGCCCTTCCCCA
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T
A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCGCCCTTTCCCT--
TGACCTTTGCCCTAN
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCGCCCTTTCCCT
GTCCGCCATTA----
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCGCCCTTTCCCT
-TGACCTTTNCNT
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCGCCCTTTCCCT
-TGACCTTGACCT
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCGCCCTTTCCCT
-TGACCTTGACCT
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCGCCCTTTCCCT
--GCTGTTACCCT
 A C G T A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T