Information for 16-TTGCCAAAGAGTA (Motif 40)

A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A
p-value:1e-5
log p-value:-1.261e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 18.7bp
Average Position of motif in Background36.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAAGAGTA
GGTGCCAAGT----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAAGAGTA
CGTGCCAAG-----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGCCAAAGAGTA
TTGCCAAG-----
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGCCAAAGAGTA
-TGCCAA------
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTGCCAAAGAGTA
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGCCAAAGAGTA---
--GCAAAACATTACTA
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAAGAGTA
ATTGCACAATA---
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGCCAAAGAGTA----
-TGCCAAAATAAACANN
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTGCCAAAGAGTA
-AGCCAATCGG--
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTGCCAAAGAGTA
ACTAGCCAATCA---
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T