Information for 3-GGCGGGGACTGCT (Motif 4)

A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
Reverse Opposite:
C G T A A T C G A G T C C G T A A C T G A C G T A G T C A T G C G T A C G T A C A C T G A G T C A G T C
p-value:1e-11
log p-value:-2.626e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 30.1bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGGACTGCT
CWGGCGGGAA-----
 A C G T A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGGACTGCT
GGGGGCGGGGCC----
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGGGACTGCT
NATNGGGNGGGGANAN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGGGACTGCT-
GGGCGATGACCAYTC
 A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCGGGGACTGCT
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGGACTGCT
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGGGACTGCT
TGGCGGGAAAHB--
 A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGGGACTGCT
NNAGGGGCGGGGTNNA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGGACTGCT
GGGGGCGGGGC-----
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCGGGGACTGCT
BTKGGCGGGAAA----
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G A T C G A C T G C G T A A G T C A C G T A C T G A T G C A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T