Information for 9-GGCAGTTAGA (Motif 33)

A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A C G T A A G T C A C G T C T A G A G T C A G T C
p-value:1e-6
log p-value:-1.484e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 26.5bp
Average Position of motif in Background39.1 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTTAGA--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGCAGTTAGA
TGGCAGTTGG-
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGCAGTTAGA
GGCVGTTR--
 A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGTTAGA
TGGCAGTTGN-
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGTTAGA--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGTTAGA
BRRCVGTTDN-
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGCAGTTAGA
-GCACTTAA-
 A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCAGTTAGA
-BCMATTAG-
 A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCAGTTAGA
NNCAATTANN
 A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Nobox/MA0125.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCAGTTAGA
ACCAATTA--
 A C T G A C T G A G T C C G T A A C T G A C G T A C G T C G T A A C T G C G T A
T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T