Information for 5-TGCTAGACCCCGG (Motif 15)

A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G
Reverse Opposite:
A G T C A T G C A C T G A T C G A C T G A C T G C G A T A T G C A C G T C G T A A T C G A G T C C T G A
p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 24.1bp
Average Position of motif in Background37.7 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGACCCCGG
AGGTGHCAGACA----
 A C G T A C G T A C G T A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGCTAGACCCCGG
-GGAAATCCCC--
 A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCTAGACCCCGG
GGCCACRCCCMK-
 A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGACCCCGG
AGGTGNCAGACAG---
 A C G T A C G T A C G T A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TGCTAGACCCCGG
---AAGACCCYYN
 A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G
A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGCTAGACCCCGG----
---CAGGCCNNGGCCNN
 A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PH0139.1_Pitx3/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGACCCCGG
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGACCCCGG-
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGCTAGACCCCGG
-GCCACACCCA--
 A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGCTAGACCCCGG---
NNANTTGACCCCTNNNN
 A C G T A G C T A C T G A T G C C G A T G T C A A T C G C G T A A G T C G T A C A T G C A G T C A T C G A C T G A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G