Information for 1-CWGAATGTCAGCCCTG (Motif 1)

A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
Reverse Opposite:
G T A C G T C A C T A G A C T G T A C G G A T C A C G T A T C G C T G A G T A C G T C A A G C T A G C T A T G C C G T A A T C G
p-value:1e-12
log p-value:-2.979e+01
Information Content per bp:1.695
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif44.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.3 +/- 15.1bp
Average Position of motif in Background45.7 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CWGAATGTCAGCCCTG
-TGAGTGACAGSC---
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CWGAATGTCAGCCCTG
NTGATTGACAGN----
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CWGAATGTCAGCCCTG
---VBTGWCAGCB---
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CWGAATGTCAGCCCTG
BTGABTGACAGS----
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CWGAATGTCAGCCCTG
---SCTGTCARCACC-
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CWGAATGTCAGCCCTG
---RHTGWCAR-----
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CWGAATGTCAGCCCTG
-----TGTCANYT---
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CWGAATGTCAGCCCTG
-------TCAGTCTT-
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CWGAATGTCAGCCCTG-
GATATTGACAGCTGCGT
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CWGAATGTCAGCCCTG
----NTGTCAN-----
 A T G C C G A T T A C G C T G A C T G A A C G T A C T G G A C T A T G C C G T A C A T G A G T C G T A C G A T C C A G T A C T G
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T