Information for 5-AYSWGGTGGSACCATM (Motif 8)

C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
Reverse Opposite:
A C G T C G T A A C G T A C T G A C T G A G C T A T C G A G T C A G T C G T C A A G T C A G T C C G A T A T C G T C A G A G C T
p-value:1e-11
log p-value:-2.669e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 27.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AYSWGGTGGSACCATM
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AYSWGGTGGSACCATM
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AYSWGGTGGSACCATM
---GGTTGGCAT----
 C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AYSWGGTGGSACCATM
---AGGTGTCA-----
 C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AYSWGGTGGSACCATM-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AYSWGGTGGSACCATM
---GGGCGGGACC---
 C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AYSWGGTGGSACCATM
---AGGTGTGA-----
 C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AYSWGGTGGSACCATM
NNCAGGTGNN------
 C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AYSWGGTGGSACCATM-
--ADGGYAGYAGCATCT
 C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AYSWGGTGGSACCATM
NGTAGGTTGGCATNNN-
 A C G T C T G A A G C T A T G C C G T A A C T G A C T G A C G T A C T G A C T G A T G C T C G A A G T C A G T C C G T A C G A T T G C A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T