Information for 9-GTAGAGCAGCCAA (Motif 23)

A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G G T A C A C G T A C T G A G T C A C G T A G T C A G C T C G T A A G T C
p-value:1e-7
log p-value:-1.793e+01
Information Content per bp:1.952
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 7.4bp
Average Position of motif in Background29.0 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GTAGAGCAGCCAA
-------TGCCAA
 A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTAGAGCAGCCAA
-----BCAGACWA
 A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTAGAGCAGCCAA-
--GGACCACCCACG
 A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GTAGAGCAGCCAA-
-----CGTGCCAAG
 A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTAGAGCAGCCAA---
----ACTAGCCAATCA
 A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GTAGAGCAGCCAA
GRTGMTRGAGCC-----
 A C G T A C G T A C G T A C G T A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GTAGAGCAGCCAA----
-------AGCCAATCGG
 A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GTAGAGCAGCCAA-
ATGTACAGTAGCAAAG
 A C G T A C G T A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GTAGAGCAGCCAA--
-----GGTGCCAAGT
 A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GTAGAGCAGCCAA-------
-GAGGGCAGCCAAGCGTGAC
 A C T G A C G T C T G A A C T G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C