Information for 6-GTTTGTGGTC (Motif 20)

A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C
Reverse Opposite:
T A C G C G T A A G T C A G T C G C T A A G T C C G T A C T G A C G T A T G A C
p-value:1e-8
log p-value:-2.037e+01
Information Content per bp:1.858
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif84.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets46.8 +/- 26.3bp
Average Position of motif in Background51.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GTTTGTGGTC--
NNHTGTGGTTWN
 A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTTTGTGGTC-
-TTTGCGGTTT
 A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GTTTGTGGTC-
GTCTGTGGTTT
 A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GTTTGTGGTC--
--CTGTGGTTTN
 A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTTGTGGTC-
-NNTGTGGTTT
 A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GTTTGTGGTC-
-GCTGTGGTTT
 A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTTTGTGGTC-
--TTGCGGTTT
 A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTTTGTGGTC--
NTCGGTGGTCGC
 A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTTTGTGGTC-
CGTGGGTGGTCC
 A C G T A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGTGGTC---
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C T G A C G T A G C T A C G T A C T G C G A T C T A G A C T G A C G T A T G C A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T