Information for 4-GATACGTGAA (Motif 16)

C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
Reverse Opposite:
A C G T A G C T A G T C C G T A A T G C A T C G A C G T G T C A A C G T A G T C
p-value:1e-9
log p-value:-2.081e+01
Information Content per bp:1.863
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.0 +/- 25.5bp
Average Position of motif in Background49.7 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GATACGTGAA
GGGTACGTGC-
 A C G T C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GATACGTGAA
-RTACGTGC-
 C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GATACGTGAA
--TACGTGCV
 C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

Hes2/MA0616.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GATACGTGAA
TAACGACACGTGC-
 A C G T A C G T A C G T A C G T C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GATACGTGAA
-GGACGTGC-
 C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

Pax6/MA0069.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GATACGTGAA
AANTCATGCGTGAA
 A C G T A C G T A C G T A C G T C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GATACGTGAA
GHCACGTG--
 C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GATACGTGAA
NACACGTGCN
 C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATACGTGAA
-ACACGTGC-
 C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GATACGTGAA
GCCACGTGT-
 C T A G C G T A A C G T G T C A A T G C T A C G A C G T A C T G C T G A C G T A
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T