Information for 1-MAGTGMTTTGCRM (Motif 1)

G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A
Reverse Opposite:
A C G T A G C T A T C G G T A C C G T A C G T A C G T A A C G T A G T C C G T A G T A C A C G T A C G T
p-value:1e-14
log p-value:-3.286e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.2 +/- 9.8bp
Average Position of motif in Background32.8 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:MAGTGMTTTGCRM
CNGTGATTTN---
 G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--MAGTGMTTTGCRM
TGCTGTGATTT----
 A C G T A C G T G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--MAGTGMTTTGCRM
TTAAGTGCTT-----
 A C G T A C G T G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MAGTGMTTTGCRM
GCAGTGATTT----
 A C G T G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--MAGTGMTTTGCRM
TTRAGTGSYK-----
 A C G T A C G T G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-MAGTGMTTTGCRM
TAATTGATTA----
 A C G T G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--MAGTGMTTTGCRM--
TNNNATGATTTCNNCNN
 A C G T A C G T G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---MAGTGMTTTGCRM
NTCAAGTGGN------
 A C G T A C G T A C G T G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:MAGTGMTTTGCRM--
-----ATTTGCATAT
 G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:MAGTGMTTTGCRM--
--TTCATTTGCATAT
 G T C A C G T A A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C T G A T G C C T G A G T C A A C G T A C G T
A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T