Information for 1-CTATATCACA (Motif 6)

A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T A C T G C G T A A C G T C G T A A C G T C T G A C T A G
p-value:1e-9
log p-value:-2.276e+01
Information Content per bp:1.882
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif117.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets46.2 +/- 24.6bp
Average Position of motif in Background46.4 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTATATCACA-
-CAAATCACTG
 A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTATATCACA---
-NWAACCACADNN
 A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTATATCACA---
--AAATCACAGCA
 A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0105.1_Arid3a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTATATCACA---
ACCCGTATCAAATTT
 A C G T A C G T A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTATATCACA--
--AAACCACAGC
 A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0127.1_Gata6_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTATATCACA---
GCGGCGATATCGCAGCG
 A C G T A C G T A C G T A C G T A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTATATCACA---
--AAACCACAGAN
 A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTATATCACA--
--AAACCACANN
 A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTATATCACA-
-NAAACCACAG
 A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTATATCACA----
-NTTTTCACACCTT
 A G T C A G C T C G T A C G A T C G T A C G A T A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T
A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T