Information for 20-CCACGCCTAATGCATG (Motif 37)

A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G
Reverse Opposite:
A T G C C G T A A G C T A C T G A G T C G T C A A C G T A G C T C T G A A C T G A C T G A T G C A C T G A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.911
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.5 +/- 14.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCACGCCTAATGCATG-
--ATGCATWATGCATRW
 A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G A C G T
A C G T A C G T C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCACGCCTAATGCATG
NNGGCCACGCCTTTN-----
 A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCACGCCTAATGCATG
---AGCCTCAGGCA--
 A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCACGCCTAATGCATG
---AGCCTCAGGCA--
 A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCACGCCTAATGCATG
---CGCCTCAGGCA--
 A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCACGCCTAATGCATG-
--ATGAATWATTCATGA
 A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G A C G T
A C G T A C G T G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCACGCCTAATGCATG-
-TACCCACAATGCATTG
 A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G A C G T
A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCTAATGCATG
GCCACGCCCCC------
 A C G T A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCTAATGCATG
GCCACGCCCACT-----
 A C G T A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCACGCCTAATGCATG
GACCACGCCCTTATT---
 A C G T A C G T A G T C G T A C C G T A A G T C A T C G A G T C A G T C A G C T C T G A C G T A A C G T A C T G A G T C C T G A A C G T A T C G
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T A C G T A C G T A C G T