Information for 1-CAGGAWRACCAGA (Motif 2)

A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A
Reverse Opposite:
A G C T T A G C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C T G
p-value:1e-16
log p-value:-3.895e+01
Information Content per bp:1.885
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.1 +/- 19.4bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAGGAWRACCAGA---
----NWAACCACADNN
 A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAWRACCAGA
NDCAGGAARTNN---
 A C G T A C G T A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAGGAWRACCAGA--
-----AAACCACAGC
 A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAGGAWRACCAGA-
----NAAACCACAG
 A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A A C G T
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAWRACCAGA
ANCAGGATGT-----
 A C G T A C G T A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGGAWRACCAGA--
-----AAACCACANN
 A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CAGGAWRACCAGA---
-----AAACCACAGAN
 A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGGAWRACCAGA
AACAGGAAGT-----
 A C G T A C G T A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGGAWRACCAGA
ACAGGAAGTG----
 A C G T A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGGAWRACCAGA
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A C T G A C T G C G T A C G A T C T A G C G T A A G T C A G T C C G T A A T C G C T G A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T