Information for 1-YGTGGCTGKK (Motif 1)

A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
Reverse Opposite:
G T A C G T C A G T A C C T G A C T A G G A T C A G T C G T C A A T G C T C G A
p-value:1e-19
log p-value:-4.586e+01
Information Content per bp:1.626
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif17.11%
Number of Background Sequences with motif3125.2
Percentage of Background Sequences with motif6.40%
Average Position of motif in Targets47.8 +/- 25.8bp
Average Position of motif in Background49.4 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---YGTGGCTGKK
NNHTGTGGTTWN-
 A C G T A C G T A C G T A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:YGTGGCTGKK
-GTGGAT---
 A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---YGTGGCTGKK
GTCTGTGGTTT--
 A C G T A C G T A C G T A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--YGTGGCTGKK
NNTGTGGTTT--
 A C G T A C G T A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-YGTGGCTGKK
CTGTGGTTTN-
 A C G T A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:YGTGGCTGKK
-TTGGCA---
 A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--YGTGGCTGKK
GCTGTGGTTT--
 A C G T A C G T A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:YGTGGCTGKK
NTTGGCANN-
 A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--YGTGGCTGKK
CACGTGGC----
 A C G T A C G T A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--YGTGGCTGKK
NGCGTGGGCGGR
 A C G T A C G T A G C T T A C G A C G T A C T G C T A G G A T C G A C T C A T G C A G T C A T G
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G