Information for 7-AATCTCTGCWGGR (Motif 9)

C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C G T A C C G A T A C T G A T G C G T C A C T A G C G T A A C T G C G T A A C G T A C G T
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.834
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets20.0 +/- 27.8bp
Average Position of motif in Background40.5 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AATCTCTGCWGGR
AAATCACTGC----
 A C G T C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AATCTCTGCWGGR
AAATCACAGCA---
 A C G T C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AATCTCTGCWGGR
CAAATCACTG-----
 A C G T A C G T C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATCTCTGCWGGR----
--DCHCAGCAGGRGGCC
 C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATCTCTGCWGGR
--DCTCAGCAGG-
 C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATCTCTGCWGGR
YTAATCCY-------
 A C G T A C G T C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AATCTCTGCWGGR
NYTAATCCYB------
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AATCTCTGCWGGR--
---CACAGCAGGGGG
 C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AATCTCTGCWGGR
NNTAATCCNGNCNN--
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATCTCTGCWGGR
TTAATCCT-------
 A C G T A C G T C G T A C G T A A C G T A G T C A C G T G A T C A C G T A T C G A G T C C G T A A C T G A C T G C T A G
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T