Information for 17-AKCAAGMTTG (Motif 47)

T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A C G T A C A T G A G T C A G C T A C G T A C T G G T A C A G C T
p-value:1e-5
log p-value:-1.330e+01
Information Content per bp:1.792
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif67.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets48.7 +/- 22.9bp
Average Position of motif in Background50.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:AKCAAGMTTG
---AAGCTTG
 T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AKCAAGMTTG----
--CAAGATGGCGGC
 T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AKCAAGMTTG-
NNTNNCAATATTAG
 A C G T A C G T A C G T T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AKCAAGMTTG-
NNTNNCAATATTAG
 A C G T A C G T A C G T T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AKCAAGMTTG----
--CAAGATGGCGGC
 T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AKCAAGMTTG-
---TTGATTGN
 T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AKCAAGMTTG
AAGGCAAGTGT-
 A C G T A C G T T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AKCAAGMTTG-----
TATTCAAGGTCATGCGA
 A C G T A C G T T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AKCAAGMTTG-------
GGAAAAATTGTTAGGAA
 T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AKCAAGMTTG-----
NGTCACGCTTGGCTGC
 A C G T T C G A A C T G G T A C C G T A C T G A A C T G G T A C A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C